ECOD: domain e3kdpA6

Domain ID e3kdpA6

A: alpha bundles
X: Calcium ATPase transmembrane domain-related
H: Calcium ATPase transmembrane domain-related
T: Calcium ATPase transmembrane domain M
F: E1-E2_ATPase,Cation_ATPase_C,Cation_ATPase_N

UID:	001246032
Type:	Automatic domain
Parent:	e1wpgA6
Range:	A:19-144,A:271-361,A:758-1016
Ligands:	CLR RB
PDB:	3kdp
PDB Description:	Sodium/potassium-transporting ATPase subunit alpha-1
UniProt:	P05024
Hsap BLAST neighbor:	P05023
Species:	Sus scrofa

Domains in the same chain:

Download Pymol

e3kdpA6	A:19-144,A:271-361,A:758-1016	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain M
e3kdpA7	A:145-270	jelly-roll	Calcium ATPase, transduction domain A	Calcium ATPase, transduction domain A
e3kdpA1	A:362-586	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain
e3kdpA5	A:580-757	HAD domain-like	HAD domain-related	HAD-like

Domains in the same PDB:

e3kdpA6	A:19-144,A:271-361,A:758-1016	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain M
e3kdpA7	A:145-270	jelly-roll	Calcium ATPase, transduction domain A	Calcium ATPase, transduction domain A
e3kdpA1	A:362-586	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain
e3kdpA5	A:580-757	HAD domain-like	HAD domain-related	HAD-like
e3kdpB2	B:18-63	Transmembrane helix in sodium-potassium ATPase beta subunit	Transmembrane helix in sodium-potassium ATPase beta subunit	Transmembrane helix in sodium-potassium ATPase beta subunit
e3kdpB1	B:64-303	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3kdpC6	C:19-144,C:271-361,C:758-1016	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain-related	Calcium ATPase transmembrane domain M
e3kdpC7	C:145-270	jelly-roll	Calcium ATPase, transduction domain A	Calcium ATPase, transduction domain A
e3kdpC2	C:362-586	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain	Metal cation-transporting ATPase, ATP-binding domain
e3kdpC5	C:580-757	HAD domain-like	HAD domain-related	HAD-like
e3kdpD2	D:18-63	Transmembrane helix in sodium-potassium ATPase beta subunit	Transmembrane helix in sodium-potassium ATPase beta subunit	Transmembrane helix in sodium-potassium ATPase beta subunit
e3kdpD1	D:64-303	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3kdpG1	G:23-49	FXYD family	FXYD family	FXYD family
e3kdpH1	H:23-49	FXYD family	FXYD family	FXYD family

Structural contacts of domain e3kdpA6 of H-group "Calcium ATPase transmembrane domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3kdpB2	A:X,Y,Z->B:x,y,z	Transmembrane helix in sodium-potassium ATPase beta subunit	Interaction Interface Pymol
e3kdpB1	A:X,Y,Z->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3kdpC2	A:x,y,z->C:X-1/2,-Y-1/2,-Z	Metal cation-transporting ATPase, ATP-binding domain	Interaction Interface Pymol
e3kdpC6	A:-X,Y-1/2,-Z+1/2->C:x,y,z	Calcium ATPase transmembrane domain-related	Interaction Interface Pymol
e3kdpA1	A:X-1,Y,Z->A:x,y,z	Metal cation-transporting ATPase, ATP-binding domain	Interaction Interface Pymol