Domain ID e3kdpD2

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  • A: extended segments
  • X: Transmembrane helix in sodium-potassium ATPase beta subunit
  • H: Transmembrane helix in sodium-potassium ATPase beta subunit
  • T: Transmembrane helix in sodium-potassium ATPase beta subunit
  • F: Na_K-ATPase
UID: 000383987
Type: Automatic domain
Parent: e3a3yB1
Range: D:18-63
Ligands: CLR
PDB: 3kdp
PDB Description: Sodium/potassium-transporting ATPase subunit beta-1
UniProt: P05027
Hsap BLAST neighbor: P05026
Species: Sus scrofa

Structure of domain e3kdpD2

Domains in the same chain:

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e3kdpD2 D:18-63 Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit
e3kdpD1 D:64-303 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3kdpA6 A:19-144,A:271-361,A:758-1016 Calcium ATPase transmembrane domain-related Calcium ATPase transmembrane domain-related Calcium ATPase transmembrane domain M
e3kdpA7 A:145-270 jelly-roll Calcium ATPase, transduction domain A Calcium ATPase, transduction domain A
e3kdpA1 A:362-586 Metal cation-transporting ATPase, ATP-binding domain Metal cation-transporting ATPase, ATP-binding domain Metal cation-transporting ATPase, ATP-binding domain
e3kdpA5 A:580-757 HAD domain-like HAD domain-related HAD-like
e3kdpB2 B:18-63 Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit
e3kdpB1 B:64-303 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3kdpC6 C:19-144,C:271-361,C:758-1016 Calcium ATPase transmembrane domain-related Calcium ATPase transmembrane domain-related Calcium ATPase transmembrane domain M
e3kdpC7 C:145-270 jelly-roll Calcium ATPase, transduction domain A Calcium ATPase, transduction domain A
e3kdpC2 C:362-586 Metal cation-transporting ATPase, ATP-binding domain Metal cation-transporting ATPase, ATP-binding domain Metal cation-transporting ATPase, ATP-binding domain
e3kdpC5 C:580-757 HAD domain-like HAD domain-related HAD-like
e3kdpD2 D:18-63 Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit Transmembrane helix in sodium-potassium ATPase beta subunit
e3kdpD1 D:64-303 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3kdpG1 G:23-49 FXYD family FXYD family FXYD family
e3kdpH1 H:23-49 FXYD family FXYD family FXYD family

Structural contacts of domain e3kdpD2 of H-group "Transmembrane helix in sodium-potassium ATPase beta subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kdpC6 D:x,y,z->C:X,Y,Z Calcium ATPase transmembrane domain-related Interaction Interface Pymol
e3kdpB2 D:x,y,z->B:-X,Y-1/2,-Z+1/2 Transmembrane helix in sodium-potassium ATPase beta subunit Interaction Interface Pymol
e3kdpB2 D:x,y,z->B:-X-1,Y-1/2,-Z+1/2 Transmembrane helix in sodium-potassium ATPase beta subunit Interaction Interface Pymol
e3kdpB1 D:x,y,z->B:-X-1,Y-1/2,-Z+1/2 Immunoglobulin-related Interaction Interface Pymol