Domain ID e3kixe3

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: Ribosomal_S5_C
UID: 001277359
Type: Automatic domain
Parent: e1pkpA2
Range: e:73-154
Ligands: MG
PDB: 3kix
PDB Description:
Species:

Structure of domain e3kixe3

Domains in the same chain:

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e3kixe4 e:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3kixe3 e:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e3kixc2 c:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3kixc1 c:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3kixe4 e:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3kixe3 e:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3kixf1 f:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3kixg1 g:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3kixh1 h:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3kixh2 h:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3kixj1 j:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3kixk1 k:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3kixl1 l:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3kixn1 n:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3kixo1 o:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3kixp1 p:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3kixr1 r:19-88 HTH HTH tri-helical
e3kixt1 t:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e3kixy1 y:2-95 RelE-like RelE-like RelE-like

Structural contacts of domain e3kixe3 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kixh1 e:X,Y,Z->h:x,y,z Ribosomal protein S8, N-terminal domain Interaction Interface Pymol
e3kixh2 e:X,Y,Z->h:x,y,z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol