Domain ID e3kjxD4

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  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: Class I glutamine amidotransferase-like
  • T: Periplasmic binding protein-like I
  • F: Peripla_BP_1
UID: 001547497
Type: Automatic domain
Parent: e8abpA3
Range: D:65-165,D:286-340
PDB: 3kjx
PDB Description: Transcriptional regulator, LacI family
UniProt: Q5LM80
Species: Ruegeria pomeroyi

Structure of domain e3kjxD4

Domains in the same chain:

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e3kjxD3 D:6-65 HTH HTH tetra-helical, lambda repressor-like
e3kjxD4 D:65-165,D:286-340 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxD2 D:166-285 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I

Domains in the same PDB:

e3kjxA1 A:8-65 HTH HTH tetra-helical, lambda repressor-like
e3kjxA3 A:65-165,A:283-340 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxA2 A:166-285 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxB3 B:8-64 HTH HTH tetra-helical, lambda repressor-like
e3kjxB4 B:65-165,B:286-340 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxB2 B:166-285 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxC3 C:8-65 HTH HTH tetra-helical, lambda repressor-like
e3kjxC4 C:65-165,C:283-340 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxC2 C:166-285 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxD3 D:6-65 HTH HTH tetra-helical, lambda repressor-like
e3kjxD4 D:65-165,D:286-340 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e3kjxD2 D:166-285 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I

Structural contacts of domain e3kjxD4 of H-group "Class I glutamine amidotransferase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kjxC2 D:x,y,z->C:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3kjxC4 D:x,y,z->C:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3kjxC3 D:x,y,z->C:X,Y,Z HTH Interaction Interface Pymol
e3kjxD4 D:x,y,z->D:X-1/2,-Y+1/2,-Z+1 Class I glutamine amidotransferase-like Interaction Interface Pymol
e3kjxD4 D:X-1/2,-Y+1/2,-Z+1->D:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol