Domain ID e3km9Y1

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: Stap_Strp_tox_C
UID: 000378439
Type: Automatic domain
Parent: e1esfA2
Range: Y:129-230
PDB: 3km9
PDB Description: Staphylococcal enterotoxin-like toxin
UniProt: A6QE84
Species:

Structure of domain e3km9Y1

Domains in the same chain:

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e3km9Y1 Y:129-230 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e3km9A18 A:22-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A17 A:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A13 A:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A15 A:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A16 A:460-565,A:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A21 A:566-611,A:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A19 A:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3km9A14 A:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9A20 A:933-985,A:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3km9A5 A:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3km9A12 A:1370-1514 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3km9B18 B:22-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B17 B:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B13 B:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B15 B:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B16 B:460-565,B:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B21 B:566-611,B:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B19 B:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3km9B14 B:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3km9B20 B:933-985,B:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3km9B5 B:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3km9B12 B:1370-1514 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3km9X1 X:129-230 beta-Grasp Ubiquitin-related Ubiquitin-like
e3km9Y1 Y:129-230 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e3km9Y1 of H-group "Ubiquitin-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3km9B17 Y:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3km9B18 Y:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3km9B16 Y:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol