Domain ID e3kni11

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  • A: few secondary structure elements
  • X: Ribosomal protein bL28-related
  • H: Ribosomal protein bL28-related
  • T: Ribosomal protein L28
  • F: Ribosomal_L28
UID: 000384111
Type: Automatic domain
Parent: e1vw4S1
Range: 1:3-96
PDB: 3kni
PDB Description:
Species:

Structure of domain e3kni11

Domains in the same chain:

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e3kni11 1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Domains in the same PDB:

e3kni01 0:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3kni11 1:3-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3kni21 2:2-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3kni31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3kni41 4:36-66 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3kni51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3kni71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3kni81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3kni91 9:2-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3kniC1 C:18-66,C:159-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3kniC2 C:67-158 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e3kniD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3kniD2 D:127-273 SH3 SH3 SH3
e3kniF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3kniG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3kniH4 H:8-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3kniH3 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3kniI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3kniI1 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3kniN1 N:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3kniO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3kniR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3kniU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3kniV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3kniW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3kniX1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3kniY1 Y:2-102 SH3 SH3 SH3
e3kniZ1 Z:2-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3kniZ2 Z:92-178 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e3kni11 of H-group "Ribosomal protein bL28-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kniI2 1:x,y,z->I:X,Y,Z L9 N-domain-like Interaction Interface Pymol