ECOD: domain e3koyC5

Domain ID e3koyC5

A: a+b two layers
X: Dodecin subunit-like
H: D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
T: D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
F: OAM_dimer

UID:	001240901
Type:	Automatic domain
Parent:	e1xrsB1
Range:	C:509-587
PDB:	3koy
PDB Description:	D-ornithine aminomutase E component
UniProt:	E3PY95
Species:	[Clostridium] sticklandii

Domains in the same chain:

Download Pymol

e3koyC3	C:5-506	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3koyC5	C:509-587	Dodecin subunit-like	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3koyC1	C:591-740	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like

Domains in the same PDB:

e3koyA3	A:5-506	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3koyA5	A:509-587	Dodecin subunit-like	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3koyA1	A:591-740	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3koyB3	B:5-506	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3koyB5	B:509-587	Dodecin subunit-like	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3koyB1	B:591-740	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3koyC3	C:5-506	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3koyC5	C:509-587	Dodecin subunit-like	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3koyC1	C:591-740	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3koyD3	D:5-506	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e3koyD5	D:509-587	Dodecin subunit-like	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3koyD1	D:591-740	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e3koyE1	E:5-114	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related
e3koyF1	F:5-114	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related
e3koyG1	G:5-114	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related
e3koyH1	H:5-114	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related	D-ornithine aminomutase S component-related

Structural contacts of domain e3koyC5 of H-group "D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3koyA5	C:x,y,z->A:X,Y,Z	D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain	Interaction Interface Pymol
e3koyA3	C:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol