| UID: | 001525190 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3kv4A2 |
| Range: | A:1-334 |
| Ligands: | AKG FE GOL HG SO4 |
| PDB: | 3ldb |
| PDB Description: | BIFUNCTIONAL ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD6 |
| UniProt: | Q6NYC1 |
| Hsap BLAST neighbor: | Q6NYC1 |
| Species: | Homo sapiens |
Structure of domain e3ldbA1
Domains in the same chain:
| e3ldbA1 | A:1-334 | jelly-roll | Double-stranded beta-helix | Double-stranded beta-helix |
Domains in the same PDB:
Structural contacts of domain e3ldbA1 of H-group "Double-stranded beta-helix":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ldbB1 | A:X,Y,Z->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e3ldbC1 | A:-Y-1/2,X-1/2,Z+1/4->C:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e3ldbC1 | A:X,Y,Z->C:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e3ldbB1 | A:Y,X,-Z->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e3ldbB2 | A:Y,X,-Z->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
| e3ldbA1 | A:x,y,z->A:-Y-1/2,X-1/2,Z+1/4 | Double-stranded beta-helix | Interaction Interface Pymol |
| e3ldbA1 | A:-Y-1/2,X-1/2,Z+1/4->A:x,y,z | Double-stranded beta-helix | Interaction Interface Pymol |
| e3ldbB1 | A:-Y-1/2,X-1/2,Z+1/4->B:x,y,z | Immunoglobulin-related | Interaction Interface Pymol |
