ECOD: domain e3lk7A2

Domain ID e3lk7A2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Mur_ligase_M

UID:	000138037
Type:	Automatic domain
Parent:	e1j6uA2
Range:	A:102-308
Ligands:	SO4
PDB:	3lk7
PDB Description:	UDP-N-acetylmuramoylalanine--D-glutamate ligase
UniProt:	Q8E186
Species:

Domains in the same chain:

Download Pymol

e3lk7A4	A:4-101	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3lk7A2	A:102-308	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3lk7A3	A:309-451	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e3lk7A4	A:4-101	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3lk7A2	A:102-308	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3lk7A3	A:309-451	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e3lk7A2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lk7A3	A:x,y,z->A:-X+1/2,Y-1/2,-Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e3lk7A3	A:-X+1/2,Y-1/2,-Z->A:x,y,z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e3lk7A4	A:x,y,z->A:X,Y,Z-1	Rossmann-related	Interaction Interface Pymol
e3lk7A3	A:x,y,z->A:X,Y,Z-1	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e3lk7A4	A:x,y,z->A:-X+1,Y,-Z+1	Rossmann-related	Interaction Interface Pymol
e3lk7A4	A:-X+1,Y,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e3lk7A2	A:x,y,z->A:-X+1,Y,-Z	P-loop domains-related	Interaction Interface Pymol
e3lk7A2	A:-X+1,Y,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol