ECOD: domain e3lk7A3

Domain ID e3lk7A3

A: a/b three-layered sandwiches
X: MurD-like peptide ligases, peptide-binding domain
H: MurD-like peptide ligases, peptide-binding domain
T: MurD-like peptide ligases, peptide-binding domain
F: Mur_ligase_C

UID:	000138038
Type:	Automatic domain
Parent:	e1e8cA2
Range:	A:309-451
Ligands:	CL
PDB:	3lk7
PDB Description:	UDP-N-acetylmuramoylalanine--D-glutamate ligase
UniProt:	Q8E186
Species:

Domain
In chain context
In PDB context

Structure of domain e3lk7A3

Domains in the same chain:

Download Pymol

e3lk7A4	A:4-101	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3lk7A2	A:102-308	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3lk7A3	A:309-451	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e3lk7A4	A:4-101	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3lk7A2	A:102-308	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3lk7A3	A:309-451	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e3lk7A3 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3lk7A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e3lk7A2	A:-X+1/2,Y-1/2,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3lk7A2	A:X,Y,Z-1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol