| UID: | 001387202 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1dcqA2 |
| Range: | C:-12-124 |
| Ligands: | UNX ZN |
| PDB: | 3mdb |
| PDB Description: | Arf-GAP with dual PH domain-containing protein 1 |
| UniProt: | O75689 |
| Hsap BLAST neighbor: | O75689 |
| Species: | Homo sapiens |
Structure of domain e3mdbC1
Domains in the same chain:
| e3mdbC1 | C:-12-124 | Glucocorticoid receptor-like | LIM domain-like | LIM domain-like |
| e3mdbC2 | C:125-253 | PH domain-like | PH domain-like | PH domain-like |
| e3mdbC3 | C:254-370 | PH domain-like | PH domain-like | PH domain-like |
Domains in the same PDB:
| e3mdbA1 | A:448-545 | SMAD/FHA domain | SMAD/FHA domain | SMAD/FHA domain |
| e3mdbB1 | B:448-545 | SMAD/FHA domain | SMAD/FHA domain | SMAD/FHA domain |
| e3mdbC1 | C:-12-124 | Glucocorticoid receptor-like | LIM domain-like | LIM domain-like |
| e3mdbC2 | C:125-253 | PH domain-like | PH domain-like | PH domain-like |
| e3mdbC3 | C:254-370 | PH domain-like | PH domain-like | PH domain-like |
| e3mdbD1 | D:5-124 | Glucocorticoid receptor-like | LIM domain-like | LIM domain-like |
| e3mdbD5 | D:125-252 | PH domain-like | PH domain-like | PH domain-like |
| e3mdbD4 | D:253-366 | PH domain-like | PH domain-like | PH domain-like |
Structural contacts of domain e3mdbC1 of H-group "LIM domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3mdbC2 | C:x,y,z->C:-Y-1/2,X+1/2,Z+1/4 | PH domain-like | Interaction Interface Pymol |
| e3mdbD1 | C:X,Y,Z->D:x,y,z | LIM domain-like | Interaction Interface Pymol |
| e3mdbD5 | C:X,Y,Z->D:x,y,z | PH domain-like | Interaction Interface Pymol |
| e3mdbD4 | C:x,y,z->D:X-1/2,-Y+1/2,-Z-1/4 | PH domain-like | Interaction Interface Pymol |
| e3mdbD1 | C:x,y,z->D:-Y-1/2,X+1/2,Z+1/4 | LIM domain-like | Interaction Interface Pymol |
| e3mdbD5 | C:x,y,z->D:-Y-1/2,X+1/2,Z+1/4 | PH domain-like | Interaction Interface Pymol |
| e3mdbB1 | C:x,y,z->B:X,Y,Z | SMAD/FHA domain | Interaction Interface Pymol |
