Domain ID e3mjgB1

Download files:
  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000393509
Type: Automatic domain
Parent: e1pdgA1
Range: B:2-102
PDB: 3mjg
PDB Description: Platelet-derived growth factor subunit B
UniProt: P01127
Hsap BLAST neighbor: P01127
Species: Homo sapiens

Structure of domain e3mjgB1

Structural contacts of domain e3mjgB1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mjgA1 B:x,y,z->A:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3mjgX7 B:X,Y,Z->X:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mjgX8 B:X,Y,Z->X:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mjgY11 B:X,Y,Z->Y:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mjgY10 B:X,Y,Z->Y:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mjgB1 B:x,y,z->B:X-1/2,-Y-1/2,-Z Cystine-knot cytokines Interaction Interface Pymol
e3mjgB1 B:X-1/2,-Y-1/2,-Z->B:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3mjgA1 B:X-1/2,-Y-1/2,-Z->A:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3mjgY10 B:-X+1/2,-Y-1,Z-1/2->Y:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3mjgX9 B:x,y,z->X:-X+1/2,-Y-1,Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e3mjgX8 B:X-1/2,-Y-1/2,-Z->X:x,y,z Immunoglobulin-related Interaction Interface Pymol