ECOD: domain e3mqkC1

Domain ID e3mqkC1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: Gar1

UID:	000409051
Type:	Automatic domain
Parent:	e2ey4C1
Range:	C:1-75
PDB:	3mqk
PDB Description:	SMALL NUCLEOLAR RNP GAR1-LIKE PROTEIN
UniProt:	Q8U029
Species:	Pyrococcus furiosus

Domain
In chain context
In PDB context

Structure of domain e3mqkC1

Domains in the same chain:

Download Pymol

e3mqkC1	C:1-75	cradle loop barrel	RIFT-related	Alanine racemase-C

Domains in the same PDB:

e3mqkA2	A:11-251	Alpha-beta plaits	Pseudouridine synthase	Pseudouridine synthase
e3mqkA1	A:252-338	cradle loop barrel	RIFT-related	PUA domain
e3mqkB1	B:4-55	Rubredoxin-like	Nucleolar RNA-binding protein Nop10-like	Nucleolar RNA-binding protein Nop10-like
e3mqkC1	C:1-75	cradle loop barrel	RIFT-related	Alanine racemase-C

Structural contacts of domain e3mqkC1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3mqkA2	C:x,y,z->A:X,Y,Z	Pseudouridine synthase	Interaction Interface Pymol
e3mqkA2	C:X-Y,-Y+1,-Z->A:x,y,z	Pseudouridine synthase	Interaction Interface Pymol
e3mqkA1	C:X-Y,-Y+1,-Z->A:x,y,z	RIFT-related	Interaction Interface Pymol
e3mqkC1	C:x,y,z->C:X,X-Y,-Z-1/6	RIFT-related	Interaction Interface Pymol
e3mqkC1	C:X,X-Y,-Z-1/6->C:x,y,z	RIFT-related	Interaction Interface Pymol
e3mqkA1	C:x,y,z->A:X-Y+1,X,Z-1/6	RIFT-related	Interaction Interface Pymol