Domain ID e3mvnA1

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  • A: a/b three-layered sandwiches
  • X: MurD-like peptide ligases, peptide-binding domain
  • H: MurD-like peptide ligases, peptide-binding domain
  • T: MurD-like peptide ligases, peptide-binding domain
  • F: Mur_ligase_C
UID: 000139604
Type: Automatic domain
Parent: e1e8cA2
Range: A:313-453
PDB: 3mvn
PDB Description: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-medo-diaminopimelate ligase
UniProt: Q7VN73
Species:

Structure of domain e3mvnA1

Structural contacts of domain e3mvnA1 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3mvnA1 A:x,y,z->A:-Y+1/2,X-1/2,Z+1/4 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:-Y+1/2,X-1/2,Z+1/4->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+3/4 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:X-1/2,-Y+1/2,-Z+3/4->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:x,y,z->A:-Y+1,-X+1,-Z+1/2 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:-Y+1,-X+1,-Z+1/2->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z+3/4 MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol
e3mvnA1 A:X-1/2,-Y-1/2,-Z+3/4->A:x,y,z MurD-like peptide ligases, peptide-binding domain Interaction Interface Pymol