Domain ID e3n25D4

Download files:
  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: PK beta-barrel domain-like
  • F: PK
UID: 001517036
Type: Automatic domain
Parent: e2g50A1
Range: D:116-217
Ligands: EDO GOL NA PRO
PDB: 3n25
PDB Description: Pyruvate kinase isozymes M1/M2
UniProt: P11974
Hsap BLAST neighbor: P14618
Species: Oryctolagus cuniculus

Structure of domain e3n25D4

Domains in the same chain:

e3n25D3 D:10-115,D:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25D4 D:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25D1 D:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Domains in the same PDB:

e3n25A1 A:12-115,A:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25A4 A:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25A3 A:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25B3 B:11-115,B:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25B1 B:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25B2 B:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25C2 C:12-115,C:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25C1 C:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25C3 C:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25D3 D:10-115,D:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25D4 D:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25D1 D:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25E3 E:10-115,E:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25E1 E:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25E2 E:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25F3 F:11-115,F:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25F1 F:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25F2 F:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25G2 G:11-115,G:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25G1 G:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25G3 G:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like
e3n25H3 H:11-115,H:218-395 TIM beta/alpha-barrel TIM barrels TIM barrels
e3n25H4 H:116-217 cradle loop barrel RIFT-related PK beta-barrel domain-like
e3n25H1 H:396-530 PK C-terminal domain-like PK C-terminal domain-like PK C-terminal domain-like

Structural contacts of domain e3n25D4 of H-group "RIFT-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3n25B3 D:x,y,z->B:X,Y,Z TIM barrels Interaction Interface Pymol
e3n25A1 D:x,y,z->A:X,Y-1,Z TIM barrels Interaction Interface Pymol
e3n25E1 D:x,y,z->E:X,Y-1,Z-1 RIFT-related Interaction Interface Pymol