ECOD: domain e3n9qA2

Domain ID e3n9qA2

A: few secondary structure elements
X: RING/U-box-like
H: RING/U-box-like
T: FYVE/PHD zinc finger
F: PHD

UID:	001605435
Type:	Automatic domain
Parent:	e3kv4A1
Range:	A:192-208,A:235-287
Ligands:	ZN
PDB:	3n9q
PDB Description:	PUTATIVE UNCHARACTERIZED PROTEIN
UniProt:	Q9GYI0
Hsap BLAST neighbor:	Q12830
Species:	Caenorhabditis elegans

Domain
In chain context
In PDB context

Structure of domain e3n9qA2

Domains in the same chain:

Download Pymol

e3n9qA2	A:192-208,A:235-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3n9qA1	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3n9qA3	A:586-704	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Domains in the same PDB:

e3n9qA2	A:192-208,A:235-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3n9qA1	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3n9qA3	A:586-704	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Structural contacts of domain e3n9qA2 of H-group "RING/U-box-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3n9qA1	A:-X+1,Y-1/2,-Z+1/2->A:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol
e3n9qA1	A:X-1,Y,Z->A:x,y,z	Double-stranded beta-helix	Interaction Interface Pymol