Domain ID e3nvvA2

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: Fer2
UID: 000410386
Type: Automatic domain
Parent: e1wriA1
Range: A:2-92
Ligands: FAD FES
PDB: 3nvv
PDB Description: XANTHINE DEHYDROGENASE/OXIDASE
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e3nvvA2

Domains in the same chain:

e3nvvA2 A:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3nvvA1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like

Domains in the same PDB:

e3nvvA2 A:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3nvvA1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3nvvB1 B:195-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3nvvB2 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3nvvC2 C:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3nvvC4 C:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvvC3 C:955-1325 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvvJ2 J:2-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e3nvvJ1 J:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e3nvvK2 K:224-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e3nvvK1 K:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e3nvvL2 L:571-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e3nvvL4 L:694-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e3nvvL3 L:955-1315 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e3nvvA2 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3nvvB1 A:X,Y,Z->B:x,y,z FAD-binding domain Interaction Interface Pymol
e3nvvC2 A:X,Y,Z->C:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3nvvC4 A:X,Y,Z->C:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e3nvvC3 A:X,Y,Z->C:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e3nvvC4 A:x,y,z->C:X,Y-1,Z MocoBD/DmpA-related Interaction Interface Pymol