Domain ID e3ocfA2

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  • A: alpha arrays
  • X: L-aspartase N-terminal domain-like
  • H: L-aspartase N-terminal domain-like
  • T: L-aspartase N-terminal domain-like
  • F: Lyase_1
UID: 000177520
Type: Automatic domain
Parent: e1vdkA3
Range: A:2-138
Ligands: CL
PDB: 3ocf
PDB Description: FUMARATE LYASE:DELTA CRYSTALLIN
UniProt: Q2YLW1
Hsap BLAST neighbor: P07954
Species:

Structure of domain e3ocfA2

Domains in the same chain:

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e3ocfA2 A:2-138 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3ocfA1 A:139-392 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3ocfA3 A:393-456 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Domains in the same PDB:

e3ocfA2 A:2-138 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3ocfA1 A:139-392 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3ocfA3 A:393-456 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3ocfB5 B:1-138 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3ocfB4 B:139-392 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3ocfB6 B:393-440 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3ocfC3 C:2-138 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3ocfC1 C:139-386 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3ocfC2 C:387-455 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like
e3ocfD5 D:0-138 L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like L-aspartase N-terminal domain-like
e3ocfD4 D:139-392 L-aspartase middle domain-like L-aspartase middle domain-like L-aspartase middle domain-like
e3ocfD6 D:393-440 L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like L-aspartase C-terminal domain-like

Structural contacts of domain e3ocfA2 of H-group "L-aspartase N-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ocfC1 A:X,Y,Z->C:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e3ocfD4 A:X,Y,Z->D:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e3ocfA3 A:-X,Y-1/2,-Z->A:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol
e3ocfA1 A:-X,Y-1/2,-Z->A:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e3ocfC1 A:-X+1,Y-1/2,-Z->C:x,y,z L-aspartase middle domain-like Interaction Interface Pymol
e3ocfB6 A:X,Y-1,Z->B:x,y,z L-aspartase C-terminal domain-like Interaction Interface Pymol
e3ocfC3 A:X,Y-1,Z->C:x,y,z L-aspartase N-terminal domain-like Interaction Interface Pymol