Domain ID e3ofcN1

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  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 000403148
Type: Automatic domain
Parent: e1gd8A1
Range: N:1-120
PDB: 3ofc
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e3ofcN1

Domains in the same chain:

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e3ofcN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e3ofc01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3ofc21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3ofc31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3ofc41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3ofcC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ofcC2 C:125-271 SH3 SH3 SH3
e3ofcE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3ofcF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3ofcG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ofcG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ofcH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3ofcI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3ofcI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3ofcJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3ofcK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3ofcN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3ofcO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ofcR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3ofcS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3ofcT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3ofcU1 U:1-102 SH3 SH3 SH3
e3ofcV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3ofcW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3ofcX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3ofcY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3ofcZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3ofcN1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ofc01 N:X,Y,Z->0:x,y,z Rubredoxin-related Interaction Interface Pymol
e3ofc01 N:x,y,z->D:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e3ofcS1 N:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol