Domain ID e3ofoJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 000402595
Type: Automatic domain
Parent: e2uubJ1
Range: J:5-102
PDB: 3ofo
PDB Description:
Hsap BLAST neighbor: P60866
Species:

Structure of domain e3ofoJ1

Domains in the same chain:

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e3ofoJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e3ofoC2 C:1-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3ofoC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3ofoE1 E:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3ofoE2 E:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3ofoF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3ofoG1 G:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3ofoH1 H:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3ofoH2 H:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3ofoJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3ofoK1 K:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ofoL1 L:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ofoN1 N:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3ofoO1 O:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3ofoP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3ofoR1 R:19-73 HTH HTH tri-helical
e3ofoT1 T:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3ofoJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ofoN1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e3ofoC2 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol