Domain ID e3ohk11

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  • A: few secondary structure elements
  • X: Ribosomal protein bL28-related
  • H: Ribosomal protein bL28-related
  • T: Ribosomal protein L28
  • F: Unmapped domains
UID: 000403490
Type: Automatic domain
Parent: e2j0111
Range: 1:8-96
Ligands: MG
PDB: 3ohk
PDB Description:
Species:

Structure of domain e3ohk11

Domains in the same chain:

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e3ohk11 1:8-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28

Domains in the same PDB:

e3ohk01 0:1-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3ohk11 1:8-96 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3ohk21 2:12-62 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3ohk31 3:1-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3ohk41 4:1-32 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e3ohk51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3ohk61 6:9-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3ohk71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3ohk81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3ohkD1 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3ohkD2 D:127-273 SH3 SH3 SH3
e3ohkF1 F:1-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3ohkG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3ohkH1 H:12-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ohkH2 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3ohkI2 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3ohkI1 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e3ohkN1 N:1-139 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3ohkO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3ohkR1 R:2-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3ohkU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3ohkV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3ohkW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3ohkX1 X:3-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3ohkY1 Y:2-102 SH3 SH3 SH3
e3ohkZ1 Z:3-93 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3ohkZ2 Z:93-179 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e3ohk11 of H-group "Ribosomal protein bL28-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ohkI2 1:x,y,z->I:X,Y,Z L9 N-domain-like Interaction Interface Pymol