ECOD: domain e3oj4E1

Domain ID e3oj4E1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	000407319
Type:	Automatic domain
Parent:	e1ogwA1
Range:	E:1-72
PDB:	3oj4
PDB Description:	Ubiquitin
UniProt:	P0CG48
Hsap BLAST neighbor:	P62979
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3oj4E1

Domains in the same chain:

Download Pymol

e3oj4E1	E:1-72	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e3oj4A1	A:1-147	UBC-like	UBC-like	UBC-like
e3oj4B1	B:1-72	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3oj4C1	C:605-635	Glucocorticoid receptor-like	A20-like zinc finger	A20-like zinc finger
e3oj4D1	D:1-147	UBC-like	UBC-like	UBC-like
e3oj4E1	E:1-72	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3oj4F1	F:605-635	Glucocorticoid receptor-like	A20-like zinc finger	A20-like zinc finger

Structural contacts of domain e3oj4E1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3oj4D1	E:x,y,z->D:X,Y,Z	UBC-like	Interaction Interface Pymol
e3oj4F1	E:X,Y,Z->F:x,y,z	A20-like zinc finger	Interaction Interface Pymol
e3oj4D1	E:x,y,z->D:X-Y,-Y,-Z	UBC-like	Interaction Interface Pymol
e3oj4D1	E:-Y,X-Y+1,Z->D:x,y,z	UBC-like	Interaction Interface Pymol