ECOD: domain e3oxnA1

Domain ID e3oxnA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: LysR_substrate

UID:	001522070
Type:	Automatic domain
Parent:	e1uthA3
Range:	A:111-187,A:290-325
PDB:	3oxn
PDB Description:	Putative transcriptional regulator, LysR family
UniProt:	Q87TP2
Species:	Vibrio parahaemolyticus

Domains in the same chain:

Download Pymol

e3oxnA1	A:111-187,A:290-325	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnA2	A:188-289	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3oxnA1	A:111-187,A:290-325	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnA2	A:188-289	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnB1	B:110-187,B:290-324	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnB2	B:188-289	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnC2	C:109-187,C:290-323	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnC1	C:188-289	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnD2	D:111-187,D:290-322	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3oxnD1	D:188-289	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3oxnA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3oxnD1	A:X,Y,Z->D:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3oxnD2	A:X,Y,Z->D:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3oxnD2	A:x,y,z->D:X-1,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3oxnA2	A:X,Y-1,Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol