Domain ID e3pcoB5

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA_synthFbeta
UID: 000142559
Type: Automatic domain
Parent: e2rhsB5
Range: B:472-694
PDB: 3pco
PDB Description: Phenylalanyl-tRNA synthetase, beta chain
UniProt: P07395
Species: Escherichia coli

Structure of domain e3pcoB5

Domains in the same chain:

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e3pcoB6 B:1-38,B:154-191 HTH HTH Putative DNA-binding domain
e3pcoB8 B:39-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pcoB1 B:192-402 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3pcoB7 B:403-475 HTH HTH Putative DNA-binding domain
e3pcoB5 B:472-694 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoB2 B:695-795 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS

Domains in the same PDB:

e3pcoA1 A:86-327 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoB6 B:1-38,B:154-191 HTH HTH Putative DNA-binding domain
e3pcoB8 B:39-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pcoB1 B:192-402 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3pcoB7 B:403-475 HTH HTH Putative DNA-binding domain
e3pcoB5 B:472-694 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoB2 B:695-795 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS
e3pcoC2 C:5-89 Long alpha-hairpin tRNA-binding arm tRNA-binding arm
e3pcoC1 C:86-327 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoD7 D:1-41,D:143-179 HTH HTH Putative DNA-binding domain
e3pcoD11 D:41-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pcoD9 D:180-391 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3pcoD8 D:392-472 HTH HTH Putative DNA-binding domain
e3pcoD10 D:473-688 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoD12 D:689-795 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS

Structural contacts of domain e3pcoB5 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pcoA1 B:x,y,z->A:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3pcoC2 B:X,Y,Z->C:x,y,z tRNA-binding arm Interaction Interface Pymol
e3pcoC1 B:X,Y,Z->C:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3pcoD12 B:X,Y,Z->D:x,y,z Anticodon-binding domain of PheRS Interaction Interface Pymol
e3pcoD10 B:X,Y,Z->D:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3pcoD10 B:X-1,Y,Z->D:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol