ECOD: domain e3pcoB5

Domain ID e3pcoB5

A: a+b three layers
X: Class II aaRS and biotin synthetases
H: Class II aaRS and biotin synthetases
T: Class II aaRS and biotin synthetases
F: tRNA_synthFbeta

UID:	000142559
Type:	Automatic domain
Parent:	e2rhsB5
Range:	B:472-694
PDB:	3pco
PDB Description:	Phenylalanyl-tRNA synthetase, beta chain
UniProt:	P07395
Species:	Escherichia coli

Domains in the same chain:

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Domains in the same PDB:

e3pcoA1	A:86-327	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3pcoB6	B:1-38,B:154-191	HTH	HTH	Putative DNA-binding domain
e3pcoB8	B:39-153	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3pcoB1	B:192-402	PheT/TilS domain	PheT/TilS domain	PheT/TilS domain
e3pcoB7	B:403-475	HTH	HTH	Putative DNA-binding domain
e3pcoB5	B:472-694	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3pcoB2	B:695-795	Alpha-beta plaits	Anticodon-binding domain of PheRS	Anticodon-binding domain of PheRS
e3pcoC2	C:5-89	Long alpha-hairpin	tRNA-binding arm	tRNA-binding arm
e3pcoC1	C:86-327	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3pcoD7	D:1-41,D:143-179	HTH	HTH	Putative DNA-binding domain
e3pcoD11	D:41-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3pcoD9	D:180-391	PheT/TilS domain	PheT/TilS domain	PheT/TilS domain
e3pcoD8	D:392-472	HTH	HTH	Putative DNA-binding domain
e3pcoD10	D:473-688	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases	Class II aaRS and biotin synthetases
e3pcoD12	D:689-795	Alpha-beta plaits	Anticodon-binding domain of PheRS	Anticodon-binding domain of PheRS

Structural contacts of domain e3pcoB5 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pcoA1	B:x,y,z->A:X,Y,Z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3pcoC2	B:X,Y,Z->C:x,y,z	tRNA-binding arm	Interaction Interface Pymol
e3pcoC1	B:X,Y,Z->C:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3pcoD12	B:X,Y,Z->D:x,y,z	Anticodon-binding domain of PheRS	Interaction Interface Pymol
e3pcoD10	B:X,Y,Z->D:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol
e3pcoD10	B:X-1,Y,Z->D:x,y,z	Class II aaRS and biotin synthetases	Interaction Interface Pymol