Domain ID e3pcoC1

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  • A: a+b three layers
  • X: Class II aaRS and biotin synthetases
  • H: Class II aaRS and biotin synthetases
  • T: Class II aaRS and biotin synthetases
  • F: tRNA-synt_2d
UID: 000996908
Type: Automatic domain
Parent: e1jjcA1
Range: C:86-327
Ligands: AMP PHE
PDB: 3pco
PDB Description: Phenylalanyl-tRNA synthetase, alpha subunit
UniProt: C9QTZ3
Hsap BLAST neighbor: O95363
Species: Escherichia coli

Structure of domain e3pcoC1

Domains in the same chain:

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e3pcoC2 C:5-89 Long alpha-hairpin tRNA-binding arm tRNA-binding arm
e3pcoC1 C:86-327 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases

Domains in the same PDB:

e3pcoA1 A:86-327 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoB6 B:1-38,B:154-191 HTH HTH Putative DNA-binding domain
e3pcoB8 B:39-153 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pcoB1 B:192-402 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3pcoB7 B:403-475 HTH HTH Putative DNA-binding domain
e3pcoB5 B:472-694 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoB2 B:695-795 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS
e3pcoC2 C:5-89 Long alpha-hairpin tRNA-binding arm tRNA-binding arm
e3pcoC1 C:86-327 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoD7 D:1-41,D:143-179 HTH HTH Putative DNA-binding domain
e3pcoD11 D:41-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pcoD9 D:180-391 PheT/TilS domain PheT/TilS domain PheT/TilS domain
e3pcoD8 D:392-472 HTH HTH Putative DNA-binding domain
e3pcoD10 D:473-688 Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases
e3pcoD12 D:689-795 Alpha-beta plaits Anticodon-binding domain of PheRS Anticodon-binding domain of PheRS

Structural contacts of domain e3pcoC1 of H-group "Class II aaRS and biotin synthetases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pcoD10 C:x,y,z->D:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3pcoD8 C:x,y,z->D:X,Y,Z HTH Interaction Interface Pymol
e3pcoD9 C:x,y,z->D:X,Y,Z PheT/TilS domain Interaction Interface Pymol
e3pcoD7 C:x,y,z->D:X,Y,Z HTH Interaction Interface Pymol
e3pcoB5 C:x,y,z->B:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3pcoB2 C:x,y,z->B:X,Y,Z Anticodon-binding domain of PheRS Interaction Interface Pymol
e3pcoA1 C:x,y,z->A:X,Y,Z Class II aaRS and biotin synthetases Interaction Interface Pymol