ECOD: domain e3pfdB3

Domain ID e3pfdB3

A: alpha bundles
X: Bromodomain-like
H: Acyl-CoA dehydrogenase C-terminal domain-like
T: Acyl-CoA dehydrogenase C-terminal domain-like
F: Acyl-CoA_dh_1

UID:	000405133
Type:	Automatic domain
Parent:	e1ivhA3
Range:	B:238-389
Ligands:	FDA IOD
PDB:	3pfd
PDB Description:	Acyl-CoA dehydrogenase
UniProt:	E7FH79
Hsap BLAST neighbor:	P11310
Species:	Mycobacterium thermoresistibile

Domains in the same chain:

Download Pymol

e3pfdB2	B:18-127	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like
e3pfdB1	B:128-238	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like
e3pfdB3	B:238-389	Bromodomain-like	Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like

Domains in the same PDB:

e3pfdA3	A:18-127	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like
e3pfdA2	A:128-238	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like
e3pfdA1	A:238-389	Bromodomain-like	Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like
e3pfdB2	B:18-127	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like
e3pfdB1	B:128-238	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like
e3pfdB3	B:238-389	Bromodomain-like	Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like
e3pfdC2	C:19-127	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like
e3pfdC1	C:128-238	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like
e3pfdC3	C:238-389	Bromodomain-like	Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like
e3pfdD2	D:18-127	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like	Acyl-CoA dehydrogenase N-terminal domain-like
e3pfdD1	D:128-238	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like	Acyl-CoA dehydrogenase middle domain-like
e3pfdD3	D:238-389	Bromodomain-like	Acyl-CoA dehydrogenase C-terminal domain-like	Acyl-CoA dehydrogenase C-terminal domain-like

Structural contacts of domain e3pfdB3 of H-group "Acyl-CoA dehydrogenase C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pfdA1	B:x,y,z->A:X,Y,Z	Acyl-CoA dehydrogenase C-terminal domain-like	Interaction Interface Pymol
e3pfdA2	B:x,y,z->A:X,Y,Z	Acyl-CoA dehydrogenase middle domain-like	Interaction Interface Pymol
e3pfdC3	B:X,Y,Z->C:x,y,z	Acyl-CoA dehydrogenase C-terminal domain-like	Interaction Interface Pymol
e3pfdD3	B:X,Y,Z->D:x,y,z	Acyl-CoA dehydrogenase C-terminal domain-like	Interaction Interface Pymol