Domain ID e3pifB6

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: PIN domain-like
  • F: XRN_N
UID: 001772856
Type: Automatic domain
Parent: e3pieA1
Range: B:3-249
Ligands: MN
PDB: 3pif
PDB Description: 5'->3' EXORIBONUCLEASE (xrn1)
UniProt: Q6CJ09
Hsap BLAST neighbor: Q8IZH2
Species: Kluyveromyces lactis

Structure of domain e3pifB6

Domains in the same chain:

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e3pifB6 B:3-249 HAD domain-like HAD domain-related PIN domain-like
e3pifB7 B:250-380,B:504-673 Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases
e3pifB1 B:381-462 R3H domain-like R3H-like domain in 5'->3' exoribonucleases R3H-like domain in 5'->3' exoribonucleases
e3pifB8 B:674-720 C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases
e3pifB2 B:721-914 SH3 SH3 SH3
e3pifB3 B:915-1155 SH3 SH3 SH3
e3pifB4 B:1156-1240 SH3 SH3 SH3

Domains in the same PDB:

e3pifA5 A:3-249 HAD domain-like HAD domain-related PIN domain-like
e3pifA7 A:250-380,A:504-673 Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases
e3pifA2 A:381-462 R3H domain-like R3H-like domain in 5'->3' exoribonucleases R3H-like domain in 5'->3' exoribonucleases
e3pifA8 A:674-720 C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases
e3pifA6 A:721-914 SH3 SH3 SH3
e3pifA3 A:915-1155 SH3 SH3 SH3
e3pifA4 A:1156-1240 SH3 SH3 SH3
e3pifB6 B:3-249 HAD domain-like HAD domain-related PIN domain-like
e3pifB7 B:250-380,B:504-673 Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases
e3pifB1 B:381-462 R3H domain-like R3H-like domain in 5'->3' exoribonucleases R3H-like domain in 5'->3' exoribonucleases
e3pifB8 B:674-720 C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases
e3pifB2 B:721-914 SH3 SH3 SH3
e3pifB3 B:915-1155 SH3 SH3 SH3
e3pifB4 B:1156-1240 SH3 SH3 SH3
e3pifC5 C:3-249 HAD domain-like HAD domain-related PIN domain-like
e3pifC8 C:250-380,C:504-673 Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases
e3pifC3 C:381-462 R3H domain-like R3H-like domain in 5'->3' exoribonucleases R3H-like domain in 5'->3' exoribonucleases
e3pifC9 C:674-720 C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases
e3pifC7 C:721-914 SH3 SH3 SH3
e3pifC6 C:915-1155 SH3 SH3 SH3
e3pifC2 C:1156-1240 SH3 SH3 SH3
e3pifD1 D:3-249 HAD domain-like HAD domain-related PIN domain-like
e3pifD7 D:250-380,D:504-673 Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases Helical domain in 5'->3' exoribonucleases
e3pifD6 D:381-462 R3H domain-like R3H-like domain in 5'->3' exoribonucleases R3H-like domain in 5'->3' exoribonucleases
e3pifD8 D:674-720 C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases C-terminal segment in 5'->3' exoribonucleases
e3pifD3 D:721-914 SH3 SH3 SH3
e3pifD4 D:915-981,D:1106-1155 SH3 SH3 SH3
e3pifD5 D:1156-1240 SH3 SH3 SH3