Domain ID e3pipQ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23
UID: 000413482
Type: Automatic domain
Parent: e2j01X1
Range: Q:2-94
PDB: 3pip
PDB Description: 50S RIBOSOMAL PROTEIN L23
UniProt: Q9RXK0
Species: Deinococcus radiodurans

Structure of domain e3pipQ1

Domains in the same chain:

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e3pipQ1 Q:2-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e3pip11 1:2-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3pip21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3pip31 3:6-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3pip41 4:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3pipA1 A:21-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pipA2 A:129-273 SH3 SH3 SH3
e3pipB1 B:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e3pipC1 C:2-195 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3pipD1 D:3-179 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3pipE1 E:5-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3pipE2 E:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3pipF1 F:74-136 HTH HTH Ribosomal protein L11, C-terminal domain
e3pipG1 G:30-171 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3pipH1 H:1-134 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3pipI1 I:11-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3pipJ1 J:6-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e3pipK1 K:3-115 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3pipL1 L:8-111 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3pipM1 M:2-109 SH3 SH3 SH3
e3pipN1 N:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3pipO1 O:5-98 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3pipP1 P:8-133 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3pipQ1 Q:2-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3pipR1 R:4-113 SH3 SH3 SH3
e3pipS1 S:1-88 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3pipS2 S:89-175 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e3pipT1 T:12-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3pipU1 U:8-79 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3pipV1 V:2-66 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3pipW1 W:1-55 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e3pipZ1 Z:3-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e3pipQ1 of H-group "Ribosomal proteins S24e, L23 and L15e":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pipV1 Q:X,Y,Z->V:x,y,z Ribosomal protein L29 (L29p) Interaction Interface Pymol