| UID: | 001812424 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3av4A4 |
| Range: | A:714-904 |
| Ligands: | ZN |
| PDB: | 3pt6 |
| PDB Description: | DNA (cytosine-5)-methyltransferase 1 |
| UniProt: | P13864 |
| Hsap BLAST neighbor: | P26358 |
| Species: | Mus musculus |
Structure of domain e3pt6A3
Domains in the same chain:
| e3pt6A4 | A:653-710 | CXXC domain-like | CXXC domain | CXXC domain |
| e3pt6A3 | A:714-904 | SH3 | SH3 | SH3 |
| e3pt6A2 | A:905-1108 | SH3 | SH3 | SH3 |
| e3pt6A1 | A:1139-1442,A:1520-1599 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e3pt6A5 | A:1438-1514 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 |
Domains in the same PDB:
| e3pt6A4 | A:653-710 | CXXC domain-like | CXXC domain | CXXC domain |
| e3pt6A3 | A:714-904 | SH3 | SH3 | SH3 |
| e3pt6A2 | A:905-1108 | SH3 | SH3 | SH3 |
| e3pt6A1 | A:1139-1442,A:1520-1599 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e3pt6A5 | A:1438-1514 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 |
| e3pt6B4 | B:653-710 | CXXC domain-like | CXXC domain | CXXC domain |
| e3pt6B3 | B:714-904 | SH3 | SH3 | SH3 |
| e3pt6B2 | B:905-1108 | SH3 | SH3 | SH3 |
| e3pt6B1 | B:1138-1442,B:1520-1599 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e3pt6B5 | B:1438-1514 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 |
Structural contacts of domain e3pt6A3 of H-group "SH3":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3pt6B2 | A:-X-1,Y-1/2,-Z-1->B:x,y,z | SH3 | Interaction Interface Pymol |
| e3pt6B5 | A:-X-1,Y-1/2,-Z->B:x,y,z | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | Interaction Interface Pymol |
| e3pt6A5 | A:x,y,z->A:X-1,Y,Z | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | Interaction Interface Pymol |
| e3pt6A2 | A:x,y,z->A:X-1,Y,Z | SH3 | Interaction Interface Pymol |
