ECOD: domain e3pt6B5

Domain ID e3pt6B5

A: few secondary structure elements
X: CXXC domain-like
H: C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1
T: C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1
F: Unmapped domains

UID:	001812431
Type:	Automatic domain
Parent:	e3av4A7
Range:	B:1438-1514
Ligands:	ZN
PDB:	3pt6
PDB Description:	DNA (cytosine-5)-methyltransferase 1
UniProt:	P13864
Hsap BLAST neighbor:	P26358
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e3pt6B4	B:653-710	CXXC domain-like	CXXC domain	CXXC domain
e3pt6B3	B:714-904	SH3	SH3	SH3
e3pt6B2	B:905-1108	SH3	SH3	SH3
e3pt6B1	B:1138-1442,B:1520-1599	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3pt6B5	B:1438-1514	CXXC domain-like	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1

Domains in the same PDB:

e3pt6A4	A:653-710	CXXC domain-like	CXXC domain	CXXC domain
e3pt6A3	A:714-904	SH3	SH3	SH3
e3pt6A2	A:905-1108	SH3	SH3	SH3
e3pt6A1	A:1139-1442,A:1520-1599	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3pt6A5	A:1438-1514	CXXC domain-like	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1
e3pt6B4	B:653-710	CXXC domain-like	CXXC domain	CXXC domain
e3pt6B3	B:714-904	SH3	SH3	SH3
e3pt6B2	B:905-1108	SH3	SH3	SH3
e3pt6B1	B:1138-1442,B:1520-1599	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e3pt6B5	B:1438-1514	CXXC domain-like	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1	C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1

Structural contacts of domain e3pt6B5 of H-group "C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3pt6A3	B:x,y,z->A:-X-1,Y-1/2,-Z	SH3	Interaction Interface Pymol