ECOD: domain e3purA1

Domain ID e3purA1

A: beta sandwiches
X: jelly-roll
H: Double-stranded beta-helix
T: Double-stranded beta-helix
F: JmjC

UID:	001571819
Type:	Automatic domain
Parent:	e3kv4A2
Range:	A:288-585
Ligands:	2HG FE2
PDB:	3pur
PDB Description:	Lysine-specific demethylase 7 homolog
UniProt:	Q9GYI0
Hsap BLAST neighbor:	Q9UPP1
Species:	Caenorhabditis elegans

Domain
In chain context
In PDB context

Structure of domain e3purA1

Domains in the same chain:

Download Pymol

e3purA2	A:192-205,A:225-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3purA1	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3purA3	A:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Domains in the same PDB:

e3purA2	A:192-205,A:225-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3purA1	A:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3purA3	A:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases
e3purC2	C:192-287	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e3purC1	C:288-585	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e3purC3	C:586-706	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases	C-terminal helical domain in Jumonji domain-containing histone demethylases

Structural contacts of domain e3purA1 of H-group "Double-stranded beta-helix":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3purA2	A:-X,Y-1/2,-Z->A:x,y,z	RING/U-box-like	Interaction Interface Pymol