Domain ID e3pynN1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S14
UID: 000412366
Type: Automatic domain
Parent: e2uubN1
Range: N:2-61
Ligands: ZN
PDB: 3pyn
PDB Description:
Species:

Structure of domain e3pynN1

Domains in the same chain:

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e3pynN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e3pynC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3pynC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3pynE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3pynE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3pynF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3pynG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3pynH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3pynH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3pynJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3pynK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3pynL1 L:4-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pynN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3pynO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3pynP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3pynR1 R:19-88 HTH HTH tri-helical
e3pynT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3pynN1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pynC2 N:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e3pynJ1 N:x,y,z->J:X,Y,Z Ribosomal protein S10 Interaction Interface Pymol