Domain ID e3pyqC2

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  • A: a+b two layers
  • X: Alpha-lytic protease prodomain-like
  • H: KH-domains
  • T: Prokaryotic type KH domain (KH-domain type II)
  • F: KH_2
UID: 000412407
Type: Automatic domain
Parent: e2uubC2
Range: C:2-106
PDB: 3pyq
PDB Description:
Species:

Structure of domain e3pyqC2

Domains in the same chain:

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e3pyqC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3pyqC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C

Domains in the same PDB:

e3pyqC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e3pyqC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e3pyqE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e3pyqE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3pyqF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e3pyqG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e3pyqH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e3pyqH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e3pyqJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e3pyqK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3pyqL1 L:4-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3pyqN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e3pyqO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e3pyqP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e3pyqR1 R:19-88 HTH HTH tri-helical
e3pyqT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e3pyqC2 of H-group "KH-domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3pyqN1 C:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e3pyqJ1 C:X,Y,Z->J:x,y,z Ribosomal protein S10 Interaction Interface Pymol