Domain ID e3qtkF1

Download files:
  • A: few secondary structure elements
  • X: Cystine-knot cytokines
  • H: Cystine-knot cytokines
  • T: Cystine-knot cytokines
  • F: PDGF
UID: 000424994
Type: Automatic domain
Parent: e1pdgA1
Range: F:6-102
Ligands: ACT TFA
PDB: 3qtk
PDB Description: VASCULAR ENDOTHELIAL GROWTH FACTOR A
UniProt: P15692
Hsap BLAST neighbor: P15692
Species:

Structure of domain e3qtkF1

Structural contacts of domain e3qtkF1 of H-group "Cystine-knot cytokines":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3qtkE1 F:x,y,z->E:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkA1 F:X,Y-1,Z->A:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3qtkF1 F:x,y,z->F:-X,Y,-Z-1 Cystine-knot cytokines Interaction Interface Pymol
e3qtkF1 F:-X,Y,-Z-1->F:x,y,z Cystine-knot cytokines Interaction Interface Pymol
e3qtkD1 F:x,y,z->D:-X,Y,-Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkA1 F:x,y,z->A:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkE1 F:x,y,z->E:-X,Y,-Z-1 Cystine-knot cytokines Interaction Interface Pymol
e3qtkD1 F:x,y,z->D:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkB1 F:x,y,z->B:X,Y,Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkF1 F:x,y,z->F:X,Y-1,Z Cystine-knot cytokines Interaction Interface Pymol
e3qtkF1 F:X,Y-1,Z->F:x,y,z Cystine-knot cytokines Interaction Interface Pymol