Domain ID e3r8sN1

Download files:
  • A: a+b two layers
  • X: Enolase-N/ribosomal protein
  • H: Prokaryotic ribosomal protein L17
  • T: Prokaryotic ribosomal protein L17
  • F: Ribosomal_L17
UID: 000420932
Type: Automatic domain
Parent: e1gd8A1
Range: N:1-120
Ligands: MG
PDB: 3r8s
PDB Description:
Hsap BLAST neighbor: Q9NRX2
Species:

Structure of domain e3r8sN1

Domains in the same chain:

Download Pymol

e3r8sN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17

Domains in the same PDB:

e3r8s01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3r8s21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3r8s31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3r8s41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3r8sC3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3r8sC4 C:125-271 SH3 SH3 SH3
e3r8sE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3r8sF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3r8sG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3r8sG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3r8sH2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3r8sI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3r8sI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3r8sJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3r8sK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3r8sN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3r8sO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3r8sR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3r8sS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3r8sT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3r8sU1 U:1-102 SH3 SH3 SH3
e3r8sV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3r8sW1 W:6-81 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3r8sX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3r8sY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3r8sZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3r8sN1 of H-group "Prokaryotic ribosomal protein L17":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3r8s01 N:X,Y,Z->0:x,y,z Rubredoxin-related Interaction Interface Pymol
e3r8s01 N:x,y,z->D:X,Y,Z Rubredoxin-related Interaction Interface Pymol
e3r8sS1 N:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol