Domain ID e3raqA6

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  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: IMS_HHH
UID: 001256093
Type: Automatic domain
Parent: e1jx4A1
Range: A:178-240
Ligands: CA
PDB: 3raq
PDB Description: DNA POLYMERASE IV
UniProt: Q97W02
Species: Sulfolobus solfataricus

Structure of domain e3raqA6

Domains in the same chain:

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e3raqA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqA7 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqA6 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3raqA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqA7 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqA6 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3raqB5 B:1001-1021,B:1077-1177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqB7 B:1022-1076 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqB6 B:1178-1240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqB2 B:1241-1341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3raqA6 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3raqB2 A:x,y,z->B:X-1,Y,Z-1 Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol