Domain ID e3raqB5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: IMS
UID: 001256147
Type: Automatic domain
Parent: e1t3nA4
Range: B:1001-1021,B:1077-1177
Ligands: CA DGT EPE
PDB: 3raq
PDB Description: DNA POLYMERASE IV
UniProt: Q97W02
Hsap BLAST neighbor: Q9UBZ9
Species: Sulfolobus solfataricus

Structure of domain e3raqB5

Domains in the same chain:

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e3raqB5 B:1001-1021,B:1077-1177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqB7 B:1022-1076 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqB6 B:1178-1240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqB2 B:1241-1341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3raqA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqA7 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqA6 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqA2 A:241-341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3raqB5 B:1001-1021,B:1077-1177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3raqB7 B:1022-1076 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3raqB6 B:1178-1240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3raqB2 B:1241-1341 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3raqB5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3raqA5 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3raqA7 B:X,Y-1,Z->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol