ECOD: domain e3rfzE3

Domain ID e3rfzE3

A: beta barrels
X: Outer membrane meander beta-barrels
H: Usher PapC translocation pore
T: Usher PapC translocation pore
F: Usher,PapC_N

UID:	001345444
Type:	Automatic domain
Parent:	e4j3oD3
Range:	E:123-237,E:312-453,E:474-659
PDB:	3rfz
PDB Description:	OUTER MEMBRANE USHER PROTEIN, TYPE 1 FIMBRIAL SYNTHESIS
UniProt:	P30130
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e3rfzE3

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e3rfzA1	A:1-158	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e3rfzA2	A:159-279	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e3rfzB1	B:26-122	FimD N-terminal domain-like	FimD N-terminal domain-like	FimD N-terminal domain-like
e3rfzB3	B:123-237,B:312-453,B:474-659	Outer membrane meander beta-barrels	Usher PapC translocation pore	Usher PapC translocation pore
e3rfzB2	B:238-311	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rfzB5	B:660-741	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3rfzB4	B:742-834	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3rfzC2	C:1-119	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rfzC1	C:120-205	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rfzD1	D:1-158	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e3rfzD2	D:159-279	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e3rfzE2	E:26-122	FimD N-terminal domain-like	FimD N-terminal domain-like	FimD N-terminal domain-like
e3rfzE3	E:123-237,E:312-453,E:474-659	Outer membrane meander beta-barrels	Usher PapC translocation pore	Usher PapC translocation pore
e3rfzE1	E:238-311	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rfzE5	E:660-741	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3rfzE4	E:742-834	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Prealbumin-like
e3rfzF2	F:1-119	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rfzF1	F:120-205	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3rfzE3 of H-group "Usher PapC translocation pore":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rfzD1	E:x,y,z->D:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e3rfzF1	E:X,Y,Z->F:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3rfzB5	E:-X+1,Y-1/2,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3rfzB3	E:-X+1,Y-1/2,-Z+1->B:x,y,z	Usher PapC translocation pore	Interaction Interface Pymol
e3rfzB4	E:-X+1,Y-1/2,-Z+1->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e3rfzE3	E:x,y,z->E:-X+1,Y-1/2,-Z	Usher PapC translocation pore	Interaction Interface Pymol
e3rfzE3	E:-X+1,Y-1/2,-Z->E:x,y,z	Usher PapC translocation pore	Interaction Interface Pymol