Domain ID e3rgpB1

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  • A: beta barrels
  • X: Barrel domain in heme-dependent catalases
  • H: Barrel domain in heme-dependent catalases
  • T: Barrel domain in heme-dependent catalases
  • F: Catalase
UID: 000419067
Type: Automatic domain
Parent: e1gweA1
Range: B:3-148,B:205-433
Ligands: HEM NO
PDB: 3rgp
PDB Description: Catalase
UniProt: P00432
Hsap BLAST neighbor: P04040
Species: Bos taurus

Structure of domain e3rgpB1

Domains in the same chain:

e3rgpB1 B:3-148,B:205-433 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3rgpB2 B:149-204 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3rgpB3 B:434-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Domains in the same PDB:

e3rgpA1 A:3-148,A:205-433 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3rgpA2 A:149-204 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3rgpA3 A:434-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3rgpB1 B:3-148,B:205-433 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3rgpB2 B:149-204 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3rgpB3 B:434-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3rgpC1 C:3-148,C:205-433 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3rgpC2 C:149-204 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3rgpC3 C:434-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases
e3rgpD1 D:3-148,D:205-433 Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases Barrel domain in heme-dependent catalases
e3rgpD2 D:149-204 First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases First alpha-helical domain in heme-dependent catalases
e3rgpD3 D:434-501 Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases Second alpha-helical domain in heme-dependent catalases

Structural contacts of domain e3rgpB1 of H-group "Barrel domain in heme-dependent catalases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rgpC1 B:X,Y,Z->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpC2 B:X,Y,Z->C:x,y,z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3rgpC3 B:X,Y,Z->C:x,y,z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3rgpD1 B:X,Y,Z->D:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpA1 B:x,y,z->A:X,Y,Z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpA3 B:x,y,z->A:X,Y,Z Second alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3rgpA2 B:x,y,z->A:X,Y,Z First alpha-helical domain in heme-dependent catalases Interaction Interface Pymol
e3rgpC1 B:-X,Y-1/2,-Z+1/2->C:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpB1 B:x,y,z->B:-X+1,Y-1/2,-Z+1/2 Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpB1 B:-X+1,Y-1/2,-Z+1/2->B:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol
e3rgpD1 B:-X+1,Y-1/2,-Z+1/2->D:x,y,z Barrel domain in heme-dependent catalases Interaction Interface Pymol