ECOD: domain e3rgpD1

Domain ID e3rgpD1

A: beta barrels
X: Barrel domain in heme-dependent catalases
H: Barrel domain in heme-dependent catalases
T: Barrel domain in heme-dependent catalases
F: Catalase

UID:	000419073
Type:	Automatic domain
Parent:	e1gweA1
Range:	D:3-148,D:205-433
Ligands:	HEM NO
PDB:	3rgp
PDB Description:	Catalase
UniProt:	P00432
Hsap BLAST neighbor:	P04040
Species:	Bos taurus

Domains in the same chain:

Download Pymol

e3rgpD1	D:3-148,D:205-433	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases
e3rgpD2	D:149-204	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases
e3rgpD3	D:434-501	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases

Domains in the same PDB:

e3rgpA1	A:3-148,A:205-433	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases
e3rgpA2	A:149-204	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases
e3rgpA3	A:434-501	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases
e3rgpB1	B:3-148,B:205-433	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases
e3rgpB2	B:149-204	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases
e3rgpB3	B:434-501	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases
e3rgpC1	C:3-148,C:205-433	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases
e3rgpC2	C:149-204	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases
e3rgpC3	C:434-501	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases
e3rgpD1	D:3-148,D:205-433	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases	Barrel domain in heme-dependent catalases
e3rgpD2	D:149-204	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases	First alpha-helical domain in heme-dependent catalases
e3rgpD3	D:434-501	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases	Second alpha-helical domain in heme-dependent catalases

Structural contacts of domain e3rgpD1 of H-group "Barrel domain in heme-dependent catalases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rgpA2	D:x,y,z->A:X,Y,Z	First alpha-helical domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpA3	D:x,y,z->A:X,Y,Z	Second alpha-helical domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpA1	D:x,y,z->A:X,Y,Z	Barrel domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpB1	D:x,y,z->B:X,Y,Z	Barrel domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpC2	D:x,y,z->C:X,Y,Z	First alpha-helical domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpC3	D:x,y,z->C:X,Y,Z	Second alpha-helical domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpC1	D:x,y,z->C:X,Y,Z	Barrel domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpC3	D:-X+1,Y-1/2,-Z+1/2->C:x,y,z	Second alpha-helical domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpA1	D:X-1,Y,Z->A:x,y,z	Barrel domain in heme-dependent catalases	Interaction Interface Pymol
e3rgpB1	D:x,y,z->B:-X+1,Y-1/2,-Z+1/2	Barrel domain in heme-dependent catalases	Interaction Interface Pymol