Domain ID e3rkdC2

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000421472
Type: Automatic domain
Parent: e1mjuL2
Range: C:108-213
PDB: 3rkd
PDB Description: Monoclonal Antibody, Light Chain
Hsap BLAST neighbor: P01834
Species: Mus musculus

Structure of domain e3rkdC2

Domains in the same chain:

e3rkdC1 C:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdC2 C:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3rkdA1 A:459-604 cradle loop barrel RIFT-related Phage tail proteins
e3rkdB1 B:460-604 cradle loop barrel RIFT-related Phage tail proteins
e3rkdC1 C:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdC2 C:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdD1 D:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdD2 D:125-224 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdH2 H:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdH1 H:125-224 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdL1 L:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3rkdL2 L:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3rkdC2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rkdD2 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3rkdL1 C:x,y,z->L:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3rkdH2 C:x,y,z->H:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol