Domain ID e3rr5A5

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  • A: a+b complex topology
  • X: Protein kinase/SAICAR synthase/ATP-grasp
  • H: Protein kinase/SAICAR synthase/ATP-grasp
  • T: ATP-grasp
  • F: DNA_ligase_A_M
UID: 001159092
Type: Automatic domain
Parent: e1a0iA2
Range: A:227-434
Ligands: MG
PDB: 3rr5
PDB Description: DNA LIGASE
UniProt: C0LJI8
Hsap BLAST neighbor: P18858
Species: Thermococcus sp. 1519

Structure of domain e3rr5A5

Structural contacts of domain e3rr5A5 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rr5A7 A:x,y,z->A:-X,Y-1/2,-Z+1/2 ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol
e3rr5A8 A:x,y,z->A:-X,Y-1/2,-Z+1/2 ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol
e3rr5A6 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Nucleic acid-binding proteins Interaction Interface Pymol
e3rr5A6 A:x,y,z->A:X-1/2,-Y+1/2,-Z Nucleic acid-binding proteins Interaction Interface Pymol
e3rr5A6 A:X-1/2,-Y+1/2,-Z->A:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e3rr5A8 A:X-1,Y,Z->A:x,y,z ATP-dependent DNA ligase DNA-binding domain Interaction Interface Pymol