ECOD: domain e3rr5A7

Domain ID e3rr5A7

A: alpha bundles
X: ATP-dependent DNA ligase DNA-binding domain
H: ATP-dependent DNA ligase DNA-binding domain
T: ATP-dependent DNA ligase DNA-binding domain
F: DNA_ligase_A_N

UID:	001159094
Type:	Automatic domain
Parent:	e1x9nA2
Range:	A:113-226
PDB:	3rr5
PDB Description:	DNA LIGASE
UniProt:	C0LJI8
Species:	Thermococcus sp. 1519

Domain
In chain context
In PDB context

Structure of domain e3rr5A7

Domains in the same chain:

Download Pymol

e3rr5A8	A:12-112	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e3rr5A7	A:113-226	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e3rr5A5	A:227-434	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3rr5A6	A:435-564	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e3rr5A8	A:12-112	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e3rr5A7	A:113-226	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain	ATP-dependent DNA ligase DNA-binding domain
e3rr5A5	A:227-434	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp
e3rr5A6	A:435-564	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e3rr5A7 of H-group "ATP-dependent DNA ligase DNA-binding domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3rr5A5	A:-X,Y-1/2,-Z+1/2->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol