Domain ID e3rvdO1

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  • A: a+b two layers
  • X: FwdE/GAPDH domain-like
  • H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
  • F: Gp_dh_C
UID: 000972710
Type: Automatic domain
Parent: e2g82A1
Range: O:149-312
Ligands: NAD SO4
PDB: 3rvd
PDB Description: Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic
UniProt: P25856
Hsap BLAST neighbor: O14556
Species: Arabidopsis thaliana

Structure of domain e3rvdO1

Domains in the same chain:

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e3rvdO2 O:-1-148,O:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdO1 O:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Domains in the same PDB:

e3rvdA2 A:0-148,A:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdA1 A:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdB2 B:-1-148,B:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdB1 B:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdC2 C:-1-148,C:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdC1 C:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdD2 D:-1-148,D:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdD1 D:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdE2 E:-1-148,E:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdE1 E:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdF2 F:-1-148,F:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdF1 F:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdG2 G:-1-148,G:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdG1 G:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdH2 H:-1-148,H:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdH1 H:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdO2 O:-1-148,O:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdO1 O:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3rvdQ2 Q:-1-148,Q:313-333 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3rvdQ1 Q:149-312 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Structural contacts of domain e3rvdO1 of H-group "Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3rvdO1 O:x,y,z->O:-X+1,-Y+1,Z Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Interaction Interface Pymol
e3rvdO2 O:x,y,z->O:-X+1,-Y+1,Z Rossmann-related Interaction Interface Pymol
e3rvdO1 O:-X+1,-Y+1,Z->O:x,y,z Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Interaction Interface Pymol
e3rvdO2 O:-X+1,-Y+1,Z->O:x,y,z Rossmann-related Interaction Interface Pymol
e3rvdB2 O:X-1/2,Y+1/2,Z+1/2->B:x,y,z Rossmann-related Interaction Interface Pymol
e3rvdF2 O:x,y,z->F:-X+1,-Y+1,Z Rossmann-related Interaction Interface Pymol