ECOD: domain e3s2kB1

Domain ID e3s2kB1

A: beta duplicates or obligate multimers
X: beta-propeller-like
H: beta-propeller
T: 6-bladed
F: Ldl_recept_b

UID:	000432220
Type:	Automatic domain
Parent:	e1ijqA1
Range:	B:628-889
Ligands:	NAG
PDB:	3s2k
PDB Description:	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 6
UniProt:	O75581
Hsap BLAST neighbor:	O75581
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3s2kB1	B:628-889	beta-propeller-like	beta-propeller	6-bladed
e3s2kB5	B:890-931	EGF-like	EGF-related	EGF/Laminin
e3s2kB6	B:932-1197	beta-propeller-like	beta-propeller	6-bladed
e3s2kB7	B:1198-1246	EGF-like	EGF-related	EGF/Laminin

Domains in the same PDB:

e3s2kA1	A:630-889	beta-propeller-like	beta-propeller	6-bladed
e3s2kA8	A:890-932	EGF-like	EGF-related	EGF/Laminin
e3s2kA9	A:933-1197	beta-propeller-like	beta-propeller	6-bladed
e3s2kA10	A:1198-1246	EGF-like	EGF-related	EGF/Laminin
e3s2kB1	B:628-889	beta-propeller-like	beta-propeller	6-bladed
e3s2kB5	B:890-931	EGF-like	EGF-related	EGF/Laminin
e3s2kB6	B:932-1197	beta-propeller-like	beta-propeller	6-bladed
e3s2kB7	B:1198-1246	EGF-like	EGF-related	EGF/Laminin
e3s2kC1	C:182-215	omega toxin-like	omega toxin-related	Colipase-like
e3s2kC2	C:216-266	omega toxin-like	omega toxin-related	Colipase-like

Structural contacts of domain e3s2kB1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3s2kC1	B:X,Y,Z->C:x,y,z	omega toxin-related	Interaction Interface Pymol
e3s2kC2	B:X,Y,Z->C:x,y,z	omega toxin-related	Interaction Interface Pymol
e3s2kA10	B:-X,Y-1/2,-Z-1/2->A:x,y,z	EGF-related	Interaction Interface Pymol
e3s2kA9	B:-X,Y-1/2,-Z-1/2->A:x,y,z	beta-propeller	Interaction Interface Pymol
e3s2kA1	B:x,y,z->A:X,Y,Z	beta-propeller	Interaction Interface Pymol