| UID: | 001204818 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1npeA1 |
| Range: | B:932-1197 |
| Ligands: | GOL NAG |
| PDB: | 3s2k |
| PDB Description: | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 6 |
| UniProt: | O75581 |
| Hsap BLAST neighbor: | O75581 |
| Species: | Homo sapiens |
Structure of domain e3s2kB6
Domains in the same chain:
| e3s2kB1 | B:628-889 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kB5 | B:890-931 | EGF-like | EGF-related | EGF/Laminin |
| e3s2kB6 | B:932-1197 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kB7 | B:1198-1246 | EGF-like | EGF-related | EGF/Laminin |
Domains in the same PDB:
| e3s2kA1 | A:630-889 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kA8 | A:890-932 | EGF-like | EGF-related | EGF/Laminin |
| e3s2kA9 | A:933-1197 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kA10 | A:1198-1246 | EGF-like | EGF-related | EGF/Laminin |
| e3s2kB1 | B:628-889 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kB5 | B:890-931 | EGF-like | EGF-related | EGF/Laminin |
| e3s2kB6 | B:932-1197 | beta-propeller-like | beta-propeller | 6-bladed |
| e3s2kB7 | B:1198-1246 | EGF-like | EGF-related | EGF/Laminin |
| e3s2kC1 | C:182-215 | omega toxin-like | omega toxin-related | Colipase-like |
| e3s2kC2 | C:216-266 | omega toxin-like | omega toxin-related | Colipase-like |
Structural contacts of domain e3s2kB6 of H-group "beta-propeller":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3s2kC1 | B:X,Y,Z->C:x,y,z | omega toxin-related | Interaction Interface Pymol |
| e3s2kA9 | B:-X,Y-1/2,-Z-1/2->A:x,y,z | beta-propeller | Interaction Interface Pymol |
| e3s2kA1 | B:x,y,z->A:X-1/2,-Y+1/2,-Z | beta-propeller | Interaction Interface Pymol |
| e3s2kA10 | B:-X+1/2,-Y,Z-1/2->A:x,y,z | EGF-related | Interaction Interface Pymol |
