Domain ID e3s9nC1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Transferrin
UID: 001525620
Type: Automatic domain
Parent: e1ryoA3
Range: C:94-247
Ligands: CO3 FE
DrugDomain: DB13949
PDB: 3s9n
PDB Description: SEROTRANSFERRIN
UniProt: P02787
Hsap BLAST neighbor: P02787
Species: Homo sapiens

Structure of domain e3s9nC1

Domains in the same chain:

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e3s9nC3 C:4-96,C:248-331 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nC1 C:94-247 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nC2 C:332-425,C:583-677 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II

Domains in the same PDB:

e3s9nA2 A:121-189,A:383-608 Phosphorylase/hydrolase-like Zn-dependent exopeptidases Zn-dependent exopeptidases
e3s9nA3 A:190-382 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3s9nA1 A:609-758 N-cbl like Transferrin receptor ectodomain, C-terminal domain Transferrin receptor ectodomain, C-terminal domain
e3s9nB2 B:121-189,B:383-608 Phosphorylase/hydrolase-like Zn-dependent exopeptidases Zn-dependent exopeptidases
e3s9nB3 B:190-382 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3s9nB1 B:609-759 N-cbl like Transferrin receptor ectodomain, C-terminal domain Transferrin receptor ectodomain, C-terminal domain
e3s9nC3 C:4-96,C:248-331 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nC1 C:94-247 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nC2 C:332-425,C:583-677 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nD3 D:4-96,D:248-330 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nD1 D:94-247 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3s9nD2 D:331-425,D:583-676 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II

Structural contacts of domain e3s9nC1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3s9nA2 C:x,y,z->A:X,Y,Z Zn-dependent exopeptidases Interaction Interface Pymol
e3s9nA2 C:x,y,z->A:X,-Y-1,-Z+1/2 Zn-dependent exopeptidases Interaction Interface Pymol