ECOD: domain e3s9nD3

Domain ID e3s9nD3

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: Transferrin

UID:	001525625
Type:	Automatic domain
Parent:	e1ryoA2
Range:	D:4-96,D:248-330
Ligands:	CO3 FE
DrugDomain:	DB13949
PDB:	3s9n
PDB Description:	SEROTRANSFERRIN
UniProt:	P02787
Hsap BLAST neighbor:	P02787
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3s9nD3	D:4-96,D:248-330	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nD1	D:94-247	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nD2	D:331-425,D:583-676	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3s9nA2	A:121-189,A:383-608	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e3s9nA3	A:190-382	The "swivelling" beta/beta/alpha domains	The "swivelling" beta/beta/alpha domain	The "swivelling" beta/beta/alpha domain
e3s9nA1	A:609-758	N-cbl like	Transferrin receptor ectodomain, C-terminal domain	Transferrin receptor ectodomain, C-terminal domain
e3s9nB2	B:121-189,B:383-608	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e3s9nB3	B:190-382	The "swivelling" beta/beta/alpha domains	The "swivelling" beta/beta/alpha domain	The "swivelling" beta/beta/alpha domain
e3s9nB1	B:609-759	N-cbl like	Transferrin receptor ectodomain, C-terminal domain	Transferrin receptor ectodomain, C-terminal domain
e3s9nC3	C:4-96,C:248-331	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nC1	C:94-247	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nC2	C:332-425,C:583-677	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nD3	D:4-96,D:248-330	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nD1	D:94-247	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3s9nD2	D:331-425,D:583-676	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3s9nD3 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3s9nB1	D:x,y,z->B:X,Y,Z	Transferrin receptor ectodomain, C-terminal domain	Interaction Interface Pymol