Domain ID e3samC5

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  • A: a+b complex topology
  • X: Insertion domain in vaccinia virus scaffolding protein D13
  • H: Insertion domain in vaccinia virus scaffolding protein D13
  • T: Insertion domain in vaccinia virus scaffolding protein D13
  • F: Pox_Rif
UID: 001175334
Type: Automatic domain
Parent: e3samA3
Range: C:271-420
Ligands: FMT
PDB: 3sam
PDB Description: Rifampicin resistance protein
UniProt: P68440
Species:

Structure of domain e3samC5

Domains in the same chain:

e3samC4 C:-11-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samC6 C:225-270,C:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samC5 C:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Domains in the same PDB:

e3samA1 A:1-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samA2 A:225-270,A:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samA3 A:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13
e3samB1 B:-1-217 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samB2 B:218-263,B:414-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samB3 B:264-413 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13
e3samC4 C:-11-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samC6 C:225-270,C:421-547 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3samC5 C:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Structural contacts of domain e3samC5 of H-group "Insertion domain in vaccinia virus scaffolding protein D13":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3samB3 C:x,y,z->B:X,Y,Z Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e3samA3 C:x,y,z->A:X,Y,Z Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e3samA1 C:X-Y+1,X,Z+1/6->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3samB2 C:X-Y+1,X,Z+1/6->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3samB3 C:X-Y+1,X,Z+1/6->B:x,y,z Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e3samC4 C:X-Y+1,X,Z+1/6->C:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol