Domain ID e3saqB2

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Pox_Rif
UID: 001138847
Type: Automatic domain
Parent: e3samA1
Range: B:31-224
PDB: 3saq
PDB Description: RIFAMPICIN RESISTANCE PROTEIN
UniProt: P68440
Species:

Structure of domain e3saqB2

Domains in the same chain:

e3saqB2 B:31-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqB3 B:225-270,B:421-480,B:501-546 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqB1 B:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Domains in the same PDB:

e3saqA7 A:32-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqA8 A:225-270,A:421-479,A:502-535 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqA6 A:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13
e3saqB2 B:31-224 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqB3 B:225-270,B:421-480,B:501-546 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3saqB1 B:271-420 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13 Insertion domain in vaccinia virus scaffolding protein D13

Structural contacts of domain e3saqB2 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3saqA8 B:-Y,X-Y+1,Z->A:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3saqA6 B:x,y,z->A:-X-2/3,-X+Y-1/3,-Z-1/3 Insertion domain in vaccinia virus scaffolding protein D13 Interaction Interface Pymol
e3saqB2 B:x,y,z->B:X-Y,-Y,-Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3saqB2 B:X-Y,-Y,-Z->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3saqB2 B:x,y,z->B:Y-2/3,X+2/3,-Z-1/3 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3saqB2 B:Y-2/3,X+2/3,-Z-1/3->B:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol